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"Aparup Das"

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"Aparup Das"

Brief Communications
Genetic Polymorphisms in VIR Genes among Indian Plasmodium vivax Populations
Purva Gupta, Veena Pande, Aparup Das, Vineeta Singh
Korean J Parasitol 2014;52(5):557-564.
Published online October 22, 2014
DOI: https://doi.org/10.3347/kjp.2014.52.5.557

The vir genes are antigenic genes and are considered to be possible vaccine targets. Since India is highly endemic to Plasmodium vivax, we sequenced 5 different vir genes and investigated DNA sequence variations in 93 single-clonal P. vivax isolates. High variability was observed in all the 5 vir genes; the vir 1/9 gene was highly diverged across Indian populations. The patterns of genetic diversity do not follow geographical locations, as geographically distant populations were found to be genetically similar. The results in general present complex genetic diversity patterns in India, requiring further in-depth population genetic and functional studies.

Citations

Citations to this article as recorded by  Crossref logo
  • Genomic dynamics of clinical Plasmodium vivax: comparative genomic hybridization in severe malaria cases
    Sampreeti Tahbildar, Pon Arunachalam Boopathi, Sanjay Kumar Kochar, Dhanpat Kumar Kochar, Mohamed Aiyaz, Raja C. Mugasimangalam, Sudha N. Rao, Ashis Das
    Frontiers in Malaria.2025;[Epub]     CrossRef
  • Population genetic analysis of Plasmodium vivax vir genes in Pakistan
    Sylvatrie-Danne Dinzouna-Boutamba, Zin Moon, Sanghyun Lee, Sahib Gul Afridi, Hương Giang Lê, Yeonchul Hong, Byoung-Kuk Na, Youn-Kyoung Goo
    Parasites, Hosts and Diseases.2024; 62(3): 313.     CrossRef
  • Misidentification of Plasmodium Species by Cross-Reacting Primers and Cerebral Malaria Caused by Plasmodium vivax
    Anoopkrishna Rai, Deepak Sebastian Pinto, Praveen Rai, Srinivas Teerthanath, Indrani Karunasagar, Rama Adiga
    Journal of Health and Allied Sciences NU.2023; 13(04): 563.     CrossRef
  • Vivax Malaria and the Potential Role of the Subtelomeric Multigene vir Superfamily
    Youn-Kyoung Goo
    Microorganisms.2022; 10(6): 1083.     CrossRef
  • Humoral and cellular immune response to Plasmodium vivax VIR recombinant and synthetic antigens in individuals naturally exposed to P. vivax in the Republic of Korea
    Sanghyun Lee, Young-Ki Choi, Youn-Kyoung Goo
    Malaria Journal.2021;[Epub]     CrossRef
  • Diversity of vir Genes in Plasmodium vivax from Endemic Regions in the Republic of Korea: an Initial Evaluation
    Ui-han Son, Sylvatrie-Danne Dinzouna-Boutamba, Sanghyun Lee, Hae Soo Yun, Jung-Yeon Kim, So-Young Joo, Sookwan Jeong, Man Hee Rhee, Yeonchul Hong, Dong-Il Chung, Dongmi Kwak, Youn-Kyoung Goo
    The Korean Journal of Parasitology.2017; 55(2): 149.     CrossRef
  • Clinical manifestations and molecular mechanisms in the changing paradigm of vivax malaria in India
    Purva Gupta, Rajni Sharma, Jagdish Chandra, Virender Kumar, Ruchi Singh, Veena Pande, Vineeta Singh
    Infection, Genetics and Evolution.2016; 39: 317.     CrossRef
  • Acute kidney injury in malaria: An update
    Anand Chellappan, D.S. Bhadauria
    Clinical Queries: Nephrology.2016; 5(1): 26.     CrossRef
  • Plasmodium vivax msp-3α polymorphisms: analysis in the Indian subcontinent
    Anju Verma, Hema Joshi, Vineeta Singh, Anup Anvikar, Neena Valecha
    Malaria Journal.2016;[Epub]     CrossRef
  • Design, construction and validation of a Plasmodium vivax microarray for the transcriptome profiling of clinical isolates
    Pon Arunachalam Boopathi, Amit Kumar Subudhi, Sheetal Middha, Jyoti Acharya, Raja Chinnadurai Mugasimangalam, Sanjay Kumar Kochar, Dhanpat Kumar Kochar, Ashis Das
    Acta Tropica.2016; 164: 438.     CrossRef
  • 10,666 View
  • 102 Download
  • 9 Web of Science
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Whole Mitochondrial Genome Sequence of an Indian Plasmodium falciparum Field Isolate
Suchi Tyagi, Veena Pande, Aparup Das
Korean J Parasitol 2014;52(1):99-103.
Published online February 19, 2014
DOI: https://doi.org/10.3347/kjp.2014.52.1.99

Mitochondrial genome sequence of malaria parasites has served as a potential marker for inferring evolutionary history of the Plasmodium genus. In Plasmodium falciparum, the mitochondrial genome sequences from around the globe have provided important evolutionary understanding, but no Indian sequence has yet been utilized. We have sequenced the whole mitochondrial genome of a single P. falciparum field isolate from India using novel primers and compared with the 3D7 reference sequence and 1 previously reported Indian sequence. While the 2 Indian sequences were highly divergent from each other, the presently sequenced isolate was highly similar to the reference 3D7 strain.

Citations

Citations to this article as recorded by  Crossref logo
  • Preventing malaria by administering a monoclonal antibody
    PRAGYAN ACHARYA
    The National Medical Journal of India.2025; 37: 259.     CrossRef
  • Long-read DNA sequencing reveals the organization of the mitochondrial genome in the early-branching dinoflagellate Oxyrrhis marina.
    Ronie Haro, Nikita Walunjkar, Soham Jorapur, Claudio H. Slamovits
    Protist.2024; 175(6): 126071.     CrossRef
  • Striking Diversity of Mitochondria-Specific Translation Processes across Eukaryotes
    Florent Waltz, Philippe Giegé
    Trends in Biochemical Sciences.2020; 45(2): 149.     CrossRef
  • Mitochondrial Inheritance in Phytopathogenic Fungi—Everything Is Known, or Is It?
    Hector Mendoza, Michael H. Perlin, Jan Schirawski
    International Journal of Molecular Sciences.2020; 21(11): 3883.     CrossRef
  • Mitochondrial population genomic analyses reveal population structure and demography of Indian Plasmodium falciparum
    Suchi Tyagi, Aparup Das
    Mitochondrion.2015; 24: 9.     CrossRef
  • New insights into the evolutionary history of Plasmodium falciparum from mitochondrial genome sequence analyses of Indian isolates
    Suchi Tyagi, Veena Pande, Aparup Das
    Molecular Ecology.2014; 23(12): 2975.     CrossRef
  • Mitochondrial genome sequence diversity of Indian Plasmodium falciparum isolates
    Suchi Tyagi, Veena Pande, Aparup Das
    Memórias do Instituto Oswaldo Cruz.2014; 109(4): 494.     CrossRef
  • 12,947 View
  • 112 Download
  • 8 Web of Science
  • Crossref