Randomly selected 435 clones from Acanthamoeba healyi cDNA library were sequenced and a total of 387 expressed sequence tags (ESTs) had been generated. Based on the results of BLAST search, 130 clones (34.4%) were identified as the genes enconding surface proteins, enzymes for DNA, energy production or other metabolism, kinases and phosphatases, protease, proteins for signal transduction, structural and cytoskeletal proteins, cell cycle related proteins, transcription factors, transcription and translational machineries, and transporter proteins. Most of the genes (88.5%) are newly identified in the genus Acanthamoeba. Although 15 clones matched the genes of Acanthamoeba located in the public databases, twelve clones were actin gene which was the most frequently expressed gene in this study. These ESTs of Acanthamoeba would give valuable information to study the organism as a model system for biological investigations such as cytoskeleton or cell movement, signal transduction, transcriptional and translational regulations. These results would also provide clues to elucidate factors for pathogenesis in human granulomatous amoebic encephalitis or keratitis by Acanthamoeba.
Citations
Citations to this article as recorded by
Construction of EST Database for Comparative Gene Studies of Acanthamoeba Eun-Kyung Moon, Joung-Ok Kim, Ying-Hua Xuan, Young-Sun Yun, Se Won Kang, Yong Seok Lee, Tae-In Ahn, Yeon-Chul Hong, Dong-Il Chung, Hyun-Hee Kong The Korean Journal of Parasitology.2009; 47(2): 103. CrossRef
Acanthamoeba Interaction with Extracellular Matrix Glycoproteins: Biological and Biochemical Characterization and Role in Cytotoxicity and Invasiveness BRUNO DA ROCHA‐AZEVEDO, MELISSA JAMERSON, GUY A. CABRAL, FERNANDO C. SILVA‐FILHO, FRANCINE MARCIANO‐CABRAL Journal of Eukaryotic Microbiology.2009; 56(3): 270. CrossRef
Sampling Gene Diversity Across the Supergroup Amoebozoa: Large EST Data Sets from Acanthamoeba castellanii, Hartmannella vermiformis, Physarum polycephalum, Hyperamoeba dachnaya and Hyperamoeba sp. Russell F. Watkins, Michael W. Gray Protist.2008; 159(2): 269. CrossRef
Anisakis simplex: Analysis of expressed sequence tags (ESTs) of third-stage larva Hak Sun Yu, Sang Kyun Park, Keun Hee Lee, Sun Joo Lee, Sun Hee Choi, Mee Sun Ock, Hae Jin Jeong Experimental Parasitology.2007; 117(1): 51. CrossRef
Molecular and biochemical characterization of a novel actin bundling protein in Acanthamoeba Joanna It-itan Alafag, Eun-Kyung Moon, Yeon-Chul Hong, Dong-Il Chung, Hyun-Hee Kong The Korean Journal of Parasitology.2006; 44(4): 331. CrossRef
Acanthamoeba healyi: Molecular cloning and characterization of a coronin homologue, an actin-related protein Eleonor T. Baldo, Eun-Kyung Moon, Hyun-Hee Kong, Dong-Il Chung Experimental Parasitology.2005; 110(2): 114. CrossRef