The small free-living amoebae, Acanthamoeba and Naegleria are widely distributed in fresh water, soil and dust throughout the world, and thus provide a potential source of meningoencephalitis and keratoconjunctivitis in humans and other mammals. Many aerobic amoebae have been cultured on plates from stool and tissue specimens, and thought to be related to disease. Acanthamoeba was recognized as a contaminant in tissue cultures before and after the first report was issued to the effect that it could cause disease in experimental animals. Some amoebae from tissue culture were mistakenly identified as Ryan virus, or when cultured for longer durations as cytopathic viruses (Chang and Owens, 1964; Eldridge and Tobin, 1967; Willaert, 1974).

Recent work on pathogenic free-living amoebae started when Culbertson and colleagues (1958) tested a tissue culture, thought to contain a cytopathic organism (now identified as A. culbertsoni) in brain sections and in tissue culture. Fowler and Carter (1965) in Australia and Butt (1966) in Florida first recognized primary amoebic meningoencephalitis (PAME) in humans and believed that the amoeba was the same or related to that examined by Culbertson. However, these are now considered to be Naegleria infections. Human PAME was found, in retrospective studies, as early as 1937 near Richmond, Virginia (dos Santos, 1970). Amoebae were also found in a museum specimen in England, in a brain preserved in 1909 (Symmers, 1969), now the earliest known example of human PAME. Since then several hundred cases of central nervous system disease caused by Acanthamoeba spp., Naegleria fowleri and Balamuthia mandrillaris have been reported worldwide. B. mandrillaris is an another opportunistic pathogen that causes granulomatous amoebic encephalitis in humans. This amoeba has yet to be isolated from nature.

Unfortunately, this amoebic disease is not well known, but clinical cases of acanthamoebic meningoencephalitis, pneumonia, and keratoconjunctivitis were reported prior up to 2002 in Korea. Naegleria and Balamuthia infections have not been reported.

The taxonomy of the group including the pathogenic free-living amoebae was clarified and updated at the generic level by P. C. Page (1967a), and a key was later published (Page, 1976). The genus Naegleria (Alexeieff 1912, emend Calkins 1913) belongs to the family Vahlkampfiidae, whereas the genus Acanthamoeba (Volkonsky 1931, emend Page 1967b) was incorporated into the family Acanthamoebidae Sawyer and Griffin (1975).

The genus Acanthamoeba was established in 1931 (Volkonsky, 1931), but until recently considerable confusion existed in the literature about its nomenclature and taxonomic status. In 1966, Pussard stated that spindle shape was an unsatisfactory feature for intergeneric differentiation, and rather considered the distinctive morphology of the cyst to be a decisive character at the generic level, and further recognized the genus Acanthamoeba. In 1967, Page considered the presence of acanthopodia and the structure of the cyst to be sufficiently distinctive and concluded that the generic designations of Acanthamoeba and Hartmannella were justified because of their trophozoite and cyst characters. In 1975, Visvesvara and Balamuth identified clearly definable and demonstrable differences not only in the trophozoite and cyst stages of Acanthamoeba and Hartmannella but also in their nutritional requirements and serologic responses. Sawyer and Griffin created the family Acanthamoebidae in 1975, and Page designated the suborder Acanthopodina in the order Amoebida. However, Page separated Acanthamoeba and Hartmannella at the ordinal level by creating a new order, Acanthopodida, that includes the family Acanthamoebidae and placed Hartmannella in the family Hartmannellidae, order Euamoebida.

On the basis of differences in the size and in the morphologic features of cysts, Pussard and Pons in 1977 recognized three groups within the genus. Although cyst characteristics make genus identification easy, differentiation at the species level is difficult. This is especially true for members of groups II and III that cannot always be differentiated by species on a morphologic basis alone. Moreover, species differentiation based on morphology alone may not always be correct, since the morphologies of cysts within a given species may vary according to culture conditions, as was shown for A. castellanii by Stratford and Griffiths (1978).

Dissimilarities between the protein banding patterns of an unknown strain and those of a described species might also be important. However, protein electrophoretic analysis is a very powerful tool for taxonomic investigations of protozoa, as large differences occur only between species and not within species (Philippe et al., 1982; Pernin et al., 1983). Tyndall et al. (1979) detected isoenzyme differences of alkaline phosphatase and esterase in different Acanthamoeba spp., and Dagett et al. (1981) found that species identification based on cyst morphology does not correlate with identification based on zymograms obtained by starch gel electrophoresis. It became clear that isoenzyme analysis could be used as a strong aid for assigning Acanthamoeba strains to species; however, different zymodemes may exist within a species, as was the case for the genus Naegleria. Therefore, a different isoenzyme pattern must not be used as the sole criterion to establish a new species nor should morphological analysis be used in isolation (De Jonckheere, 1983).

Efforts have been made to include other features in addition to morphology in the classification of Acanthamoeba, such as isoenzyme profiles and restriction fragment length polymorphisms of mitochondrial DNA (Bogler et al., 1983). Ribosomal DNA plasmid restriction maps of 10 strains and rDNA hybridization patterns of 61 additional strains have been used to assess inter- and intra-specific diversity and phylogenetic relationships in the Naegleria (Clark et al., 1989). Phylogenetic analysis of the rDNA data has also been used to elucidate the affinities of various Acanthamoeba species (Dagget et al., 1985). Later, De Jonckheere (1987) and Page (1988) accepted this rDNA classification with a few changes. Kong and Chung (2002) described a riboprinting scheme for the identification of unknown Acanthamoeba Korean isolates at the species level by using PCR-RFLP of small subunit ribosomal RNA gene using 4 kinds of restriction enzymes. In addition, interstrain polymorphisms of isoenzyme profiles and of Mt DNA RFLP patterns were observed among seven strains of A. polyphaga and four strains of A. castellanii (Kong et al., 1995; Chung et al., 1996; Kong and Chung, 1996). Yu et al. (1999) investigated the value of mitochondrial small subunit rRNA gene (mtSSU rDNA) PCR-RFLP as a taxonomic tool for Acanthamoeba isolates with close relationships. Morever, mitochondrial riboprinting may have an advantage over nuclear 18S rDNA riboprinting because the mtSSU rDNAs do not seem to possess the introns found in the 18S genus of Acanthamoeba that distort phylogenetic analysis. This approach may provide an alternative to the rDNA sequencing for the rapid identification of a new clinical isolate or for the identification of a large number of environmental isolates of Acanthamoeba.

As a result, the most recent identification attempts have been based on morphologic, biochemical and molecular criteria, such as protein profiles, isoenzymes, antigens, and DNA restriction fragment-length polymorphism analysis.

In the present study, a new species of Acanthamoeba was isolated from a freshwater fish in Korea and tentatively named Korean isolate YM-4 (strain CDC-Fish-SK, Center for Disease Control, USA). The morphologic characteristics of its cysts were similar to those of A. culbertsoni and A. royreba, which were previously designated as Acanthamoeba group III. In the terms of the mortality of experimentally infected mice, Acanthamoeba YM-4 was found to be highly virulent. Moreover, the isoenzyme profile of Acanthamoeba YM-4 was similar to that of A. royreba, and an anti-Acanthamoeba YM-4 monoclonal antibody was found to react only with Acanthamoeba YM-4, and not with A. culbertsoni. Random amplified polymorphic DNA marker analysis and RFLP analysis of mitochondrial DNA and of 18S small subunit ribosomal RNA, placed Acanthamoeba YM-4 in a separate cluster based on phylogenic distances. Thus Acanthamoeba YM-4 was identified as a new species, and assigned Acanthamoeba sohi, in honor of Emeritus Professor Chin-Thack Soh of Yonsei University College of Medicine, Seoul, Korea.

The generic characteristics of Acanthamoeba are reasonably distinct and they are readily recognized. However, identification at the species level is difficult because it is based on morphologic features that are not as clear, e.g., size and subtle morphologic differences in the cyst stage. Generic characters include the striking morphologic characters of the trophozoites and cysts. The amoebae are flat and irregular and project pointed, slender, and flexible micropseudopodia called acanthopodia. The cysts are polyhedral or convex with double walls, and consist of an outer ectocyst, and an inner endocyst. The two walls meet at several places, and pores or ostioles are evident at the wall junctions. Each pore is closed with plugs.

The two genera also differ in terms of the anatomy of the mitotic spindle. Acanthamoeba exhibits standard mitosis with loss of the nuclear membrane and disappearance of the nucleolus. Amoebae generally lack centrioles, but some species of Acanthamoeba contain centriolar equivalents (Sawyer and Griffin, 1971). In Naegleria, both the nucleolus and the nuclear membrane remain during mitosis.

The life cycle of Acanthamoeba is comprised of two distinct stages, as motile vegetative trophozoites and as nonmotile resistant cysts. The sizes of trophozoites and cysts vary among species, and both trophozoite and cyst are characterized by a single nucleus that has a large, dense, centrally located nucleolus. Acanthamoeba trophozoites, being approximately 10-45 µm, have an irregular appearance with spine-like pseudopodia. The cysts are polyhedral, about 20 µm or more in diameter, with a wall consisting of a stellate endocyst and a rippled ectocyst (Fig. 1).

The trophozoites of Naegleria commonly assume a monopodial form, and in size from 7 to 20 µm. Naegleria cysts are generally uninucleate, round with a smooth wall, and 7 to 10 µm in diameter. A transient flagellate phase in Naegleria may be induced on contact with water, or by other causes (Fulton, 1970). The central nucleolus represents the diagnostic feature of amoebae of these genera in histopathologic sections. Its shape during locomotion permits a distinction to be made between Acanthamoeba and Naegleria trophozoites. Acanthamoeba in locomotion is characterized by spiny acanthopodia and a slower locomotion without smooth anterior eruptions. Naegleria has smooth contours and can move one to two lengths in a minute, with hemispherical eruptions alternating from side to side its advancing front.

Numerous vacuoles of three different structures, varying in size and shape, were observed to contain remnant degenerated food particles in A. culbertsoni. A rough endoplasmic reticulum, some of which was associated with small vacuoles, was observed in the trophozoite of N. fowleri. Mitochondria comprising typical cristae were abundantly distributed all over the cytoplasm in A. culbertsoni and also in N. fowleri (Im et al., 1976). An ultrastructural study was undertaken to elucidate morphological differences between N. fowleri trophozoites in the brain tissues of mice and in axenic culture medium. In amoebae from axenic culture, mitochondria were oval, round, and cylindrical in shape and stained darkly, whereas those of amoebae from mouse brain tissue were dumbbell shaped. However, the stain was not unique, but light and/or dark. The rough endoplasmic reticulum of amoebas in brain tissue was tubular, but in culture it was vesicular or tubular in shape. Empty vacuoles were demonstrated in amoebae from culture, while food vacuoles with myelinated structures were abundant in those obtained from brain tissue, suggesting a strong phagocytic process (Ryu et al., 1984).

B. mandrillaris has a vegetative trophic stage and a dormant cyst stage. Its trophozoites measure 15-60 µm in diameter and are characterized by a round nucleus with a large, spherical, densely staining nucleolus. The nucleus may have more than one nucleolus in some cases and this feature distinguishes this amoeba from Acanthamoeba, especially in tissue section (Visvesvara and Stehr-Green, 1990; Visvesvara et al., 1993). During the early stages of mitosis the nucleolus and the nuclear membrane both remain intact, but disappear as mitosis progresses. The nucleus is surrounded by abundant cytoplasm containing empty vacuoles, numerous mitochondria, ribosomes, and endoplasmic reticulum. The trophozoites form broad pseudopodia and move slowly. Occasionally, the amoebae produce finger-like pseudopodia and exhibit a spider-like walking movement across the floor of tissue culture cells on which they are feeding. The cyst is usually spherical and measures 6-30 µm in diameter, with a mean of 15 µm, and is usually uninucleate and possesses a layer of refractile granules beneath the inner cysts wall. Under the optical microscope they resemble Acanthamoeba cyst with an outer wrinkled wall (the ectocyst) and an inner thin wall (the endocyst), but ultrastructurally they are tripartite with an additional thick, amorphous, fibrillar middle layer, the mesocyst (Visvesvara et al., 1993).

The real incidence of amoebic encephalitis is not precisely known. Up to August 2000, more than 120 cases of granulomatous encephalitis due to Acanthamoeba spp. and more than 3000 cases of acanthamoebic keratitis had been reported. Many of those reports describe the clinical manifestations of eye infections caused by Acanthamoeba, and suggest that such infections may be more prevalent than was previously recognized. More than 190 cases of meningoencephalitis due to N. fowleri have been reported worldwide, and more than 85 additional reports of encephalitis due to B. mandrillaris have been issued. The actual number is probably substantially higher, as diagnosis is usually made at autopsy, which is seldom done in many countries (Ma et al., 1990).

Small free-living amoebae are distributed ubiquitously in nature, and thus accurate information on ecology and distribution in nature is particularly important since some species of free-living amoebae may cause disease in man and animals. Free-living amoebae have been isolated from a variety of habitats including fresh water ponds and lakes, domestic water supplies, hot springs and spas, swimming pools, aquaria, power plant thermal discharges, soil, sewage, sea water, ocean sediments, dust in air, and the cooling towers of electric and nuclear power plants. In humans they have been found in the noses and throats of patients with respiratory illness and in healthy individuals, and in bronchial secretions, ear discharges, and in stool samples from patients with diarrhea. Frequently, the source of infection was not identified but was presumed to be moist soil, dust or water. Pathogenic amoebae have been isolated from brackish and marine sediments, from a humidifier and from a dialysis apparatus. Cysts of Acanthamoeba species can withstand drying, and thus transport by water and air is possible. A number of Acanthamoeba sp. and Naegleria sp. were isolated from the sewage, water puddles, a storage reservoir and the gills of a fresh-water fish in Korea (Im and Shin, 2003).

Acanthamoeba spp. and N. fowleri are usually isolated from non-nutrient agar plates coated with killed-Escherichia coli by environmental sample inoculation. Unlike Acanthamoeba spp. and N. fowleri, B. mandrillaris does not grow on agar plates covered with gram-negative bacteria (Visvesvara et al., 1993), which are usually used for isolating free-living amoebae from nature. These amoebae grow well at 35-37℃ on monkey kidney cells or on human lung fibroblasts in fetal bovine serum. Bovee (1963) found that the shapes and sizes of the trophozoites and cysts of Acanthamoeba may be influenced by starvation, and thus, the nutritional status should be considered during culture.

According to the results of Costas and Griffiths (1984), 36 distinct patterns of growth response are generated using numerical profiles, but it is possible to distinguish 37 strains of Acanthamoeba within this total diversity of 20 sub-generic groups, which although not completely congruent morphologically distinguished species, are consistent with other nonmorphological characteristics. Seo et al. (1992) successfully cryopreserved free-living amoebae in order to maintain them easily in the laboratory. The viability of trophozoites was higher when frozen by slow cooling (overall 0.7℃/min.) than by fast cooling (overall 1.3℃/min.). Glycerol and dimethylsulfoxide at a final concentration of 7.5% of each was used to cryopreserve free-living amoebae trophozoites. Survival rates were 2-39% after storage in liquid nitrogen for 60 days.

The specific and non-specific cytolytic activities of free-living amoebae have been emphasized by many researchers, even though their pathogeneses are not been well known. Several investigations have shown that pathogenic free-living amoeba will lyse various mammalian target cells. In addition, contact between amoeba and target cells would appear to be a pre-requisite for subsequent target cell damage, indicating that amoebic cell surface molecules have a role in the lytic event. To define the molecular nature of the amoebic lytic mechanism, Kim et al. (1989) employed cytolytic assays to isolate and characterize lytic components that may participate in cytopathogenicity. A cytolytic substance was purified from A. culbertsoni and turned out to be a 33,000 dalton protein by gel filtration and SDS PAGE. In addition, a secretory proteinase from A. castellanii was observed to degrade IgA, IgG and IgM antibodies, interleukin-1α and IL-1β, also rapidly degraded endogenous protease inhibitors (Na et al., 2002). A difference was noted between the cysteine proteinase activities of A. culbertsoni and A. royreba (Kim et al., 1989). The amino acids essential for the intracellular proteinase reactivity of A. culbertsoni trophozoites are serine and arginine, and serine and cysteine required for extracellular proteinase reactivity, as observed by gelatin-containing polyacrylamide gel electrophoresis (Seo et al., 1991; Rhim, 1997). Kong et al. (2000) purified and characterized a serine proteinase secreted by Acanthamoeba healyi, and suggested that it may play an important role in pathogenesis of granulomatous amoebic encephalitis by A. healyi. Park et al. (1993) purified a slightly cytotoxic substance of 17,500 daltons from N. fowleri, and confirmed that cysteine and aspartic acid residues were responsible for its cytotoxic activity. Hadas and Mazur (1993) found that cysteine proteinase is more active in pathogenic strains of amoeba, whereas serine proteinases are found in both pathogenic and non-pathogenic strains. Cysteine proteinases have also been shown to play important roles in the pathogenesis of parasitic protozoan infections (North et al., 1990; Mckerrow et al., 1992). It has been suggested that the cysteine proteinase found in the adult worms of Schistosoma mansoni (Chappel and Dresden, 1987), Fasciola hepatica (Rege et al., 1989), and Clonorchis sinensis (Park et al., 1995) hydrolyze hemoglobin and collagen, and play an important role in parasitic invasion and the acquisition of nutrients. These enzymes may play important roles in the metabolism, development, and survival of parasitic protozoans and thus they have been proposed as targets for the development of anti-protozoan agents.

The specific and non-specific cytolytic processes of free-living amoebae have been emphasized, and cytolytic ability related to hydrolysis by amoebic enzymes has also been reported in Naegleria sp. Kim et al. (1988) observed differences in hydrolases activity between A. culbertsoni and A. royreba. The hydrolases detected in trophozoite extracts and in culture media were; acid phosphatase, β-N-acetylgalactosaminidase, β-N-acetyglucosaminidase, α-mannosidase, neutral proteinase and acid proteinase, all of which were detected at a remarkably higher rate in A. culbertsoni than in A. royreba. Hydrolysis activities in A. culbertsoni cultured with Chinese hamster ovary (CHO) cells were assayed according to culture time. The activities of acid phosphatase, β-N-acetylgalactosaminidase, β-N-acetyl glucosaminidase, α-mannosidase and acid proteinase in this pathogenic amoeba were higher in amoeba lysates than in culture media, but after 120 hours of cultivation these activities were higher in culture media than in amoeba lysates (Fig. 2).

According to ultrastructural observations by Im et al. (1976), the reaction product of acid phosphatase is present in aggregates in the membrane and within vacuoles, especially in large vacuoles. But the peroxidase reaction product was not observed in trophozoites of A. culbertsoni and N. fowleri.

Trophozoites undergo cellular differentiation into cysts during unfavorable condition. In order to understand the cellular differentiation involved, Park et al. (2002) followed changes in the profiles of major proteins by 2D-PAGE, and of ubiquitinated proteins by immunoblotting. Fifty-one proteins present in the trophozoites of A. castellanii were lost upon encystment, and a cyst-specific 33 kDa protein was identified as a subtilisin-like serine proteinase by N-terminal sequencing. On the other hand, N. fowleri trophozoites may transform into flagellates in water at 45℃ (Griffin, 1973).

The zymodeme patterns of glucose-6-phosphate dehydrogenase (G6PD), malate dehydrogenase (MDH), hexokinase (HK), glutamate oxaloacetate transaminase (GOT) and malic enzyme (ME), that were observed by starch gel electrophoresis, differred in the strains of free-living amoebae of Acanthamoeba and Naegleria. In spite of the polymorphic zymodemes, a slow band of G6PD and HK and an intermediate band of MDH were observed only in pathogenic Acanthamoeba spp., which could be used as isoenzymatic makers to determine free-living amoebae virulence (Han et al., 1982; Kim et al., 1984; Im et al., 1999). A considerable number of interstrain polymorphisms were observed in nine isoenzyme band patterns of the six isolates obtained from contact lens containers in Korea (Shin et al., 1999).

By SDS-PAGE, at least nine major protein bands (97, 81, 66, 53, 40, 39, 28, 25, and 23 kDa) were noticed in the lysate of N. fowleri. As a result of EITB, immunized serum was reacted with major four bands (53, 40, 39 and 23 kDa) of N. fowleri antigens. By EITB using infected sera, the 53 and 25 kDa bands were identified as major protein bands. In conclusion, the 23 and 25 kDa antigens were found to be specific for immunization and infection, respectively (Shin et al., 1992).

Shin et al. (2001b) cloned an antigen-related gene from a cDNA expression library of N. fowleri by immunoscreening with sera obtained from mice that were either immunized or infected. The coding nucleotide sequence of the cloned gene, designated nfa1, consisted of 357 bases. The deduced amino acid sequence of Nfa1 protein shares 43% identity with recombinant myohemerythrin protein, which exhibited strong immunoreactivity to infected, immune, and anti-Nfa1 sera. Nfa1 protein showed pseudopodiumspecific immunolocalization on a trophozoite of N. fowleri (Cho et al., 2003).

Protective immunity was developed effectively in mice immunized with i.p. injections of N. fowleri trophozoites, and active or passive protective immunity against N. fowleri infection was demonstrated in immunized mice and in mice born to immune mothers. However, the effectiveness of immunization was greatly impaired in terms of mortality in immune mice born to immune mothers when N. fowleri or A. culbertsoni was infected intranasally (Im and Lee, 1985; Lee et al., 1985). Ahn et al. (1986) studied the vertical transmission of immunity against N. fowleri infection from dams to offspring in a murine model. Based on the results obtained, it was considered that maternal immunity is transferred to offspring through the placenta and/or milk. Moreover, vertical immunity transmission through milk is generally more powerful than that via the placenta (Fig. 3).

According to the investigation of Kim et al. (1986) on role of the thymus on protective immunity in mice, thymectomy and treatment with anti-thymocyte serum increased the mortality rate or shortened the survival of mice infected with N. fowleri. They might have been due to the depression of T cell mediated immunity in the host. It was also observed that splenectomy has no influence on the development of primary amoebic meningoencephalitis in mice infected with N. fowleri (Shin et al., 1985). Overall, the results by Soh et al. (1992) suggested that anti-N. fowleri monoclonal antibodies administered before infection, reduce mortality and prolong survival in infected mice. The role of the passive cell-mediated transfer of immunity against experimental amoebic meningoencephalitis was studied in mice (Im et al., 1988). Transplants of normal or immune splenocytes seem to alter the pattern of the amoebic meningoencephalitis development. Moreover, splenocytes transferred from immune mice reduced the mortality rate in the N. fowleri infected mice versus mice receiving normal splenocytes or no splenocytes. The blastogenic response of splenocytes to both lipopolysaccharide and concanavalin A was elevated 7 days after infecting mice transinoculated with immune splenocytes. The serum antibody titers in the mice treated with immune splenocytes increased gradually from day 7 to day 20 after infection, suggesting that splenocytes transferred from immunized mice confer immunity against N. fowleri infection.

Park et al. (1987) observed changes in the blastogenic responses of splenic lymphocytes to N. fowleri lysate and concanavalin A, the latter of which acts as a T-cell mitogen. The mean blastogenic response of splenocytes to N. fowleri lysate was reduced, whereas that to concanavalin A was also reduced up to day 11 after infection. These results indicate that cell-mediated immunity to N. fowleri lysate is impaired during the acute course of experimental amoebic meningoencephalitis in mice. In order to test lymphocyte function in N. fowleri infected mice, the in vitro blastogenic response of splenocyte cultures to non-specific mitogens, concanavalin A or lipopolysaccharide was examined (Im et al., 1987). For the first 14 days following N. fowleri infection, the lymphoblastic transformation induced by concanavalin A was markedly reduced versus uninfected control mice, and blastogenic response to lipopolysaccharide remained depressed in infected mice up to 14 days after infection. These results suggest that cell-mediated immunity is suppressed during the acute course of experimental Naegleria meningoencephalitis in mice. Lee et al. (1989) observed differences in the cell-mediated immune responses in mice infected with Naegleria spp. of different virulence; i.e., strongly virulent N. fowleri, weakly virulent N. jadini and non-virulent N. gruberi. Variations in immune responses and changes of antibody titers were noted according to infection duration. In regard to delayed type hypersensitivity responses in N. fowleri or A. culbertsoni infected mice, an increase was noted, but these declined after 7 days (Kim et al., 1990). The blastogenic response of splenocytes also increased after 10 days in the N. fowleri infected group. These results indicate differences in cell mediated immunity and serum antibody titers in mice infected with three Naegleria sp. strains of different virulence. The levels of splenocyte blastogenesis induced by concanavalin A and lipopolysaccharide showed increasing tendencies a week after A. culbertsoni infection by intranasal inoculation in mice (Im et al., 1989). The number of Ly2⁺ and L3/L4⁺ T lymphocytes in the N. fowleri-infected mice were significantly increased 7 days after infection, and LR1⁺ lymphocytes in infected mice tended to increase. Interleukin-2 was much suppressed on day 14, which may have resulted from an exhausted host immune response (Kim, 1993; Lyu et al., 1993). This indicates that cell mediated immunity after N. fowleri infection acts on the host's protective immunity at around the 7th day postinfection.

In a test of the in vitro amoebicidal activity of C3H/HeJ mouse peritoneal macrophages, the intraperitoneal administration of silica (0.5 mg/0.5 ml) reduced the amoebicidal activity of macrophages. The level of interleukin-1β measured by ELISA, was highest in infected mice not treated with silica and lowest in treated infected mice. This showed that macrophages played a significant role in the defense mechanism against the development of experimentally induced Acanthamoeba meningoencephalitis (Lee et al., 1994). Myung et al. (1988) observed the effect of zinc deficiency on immune response in mice immunized with N. fowleri. In mice with zinc deficiency, the proliferative responses of splenocytes to concanavalin A and N. fowleri lysate and the stimulation index to phytohemagglutinin were diminished after immunization, and the IgG level was reduced 5 weeks after immunization.

Shin et al. (2001a) in a transmission electron microscopy (TEM) study, found that microglial cells cocultured with A. culbertsoni trophozoites underwent a necrotic process, and that this was accompanied by lysis of the cell membrane. TEM of microglial cells cocultured with amoebic lysate showed that the membranes of the small cytoplasmic vacuoles and cell membranes were lysed. The amounts of TNF-α secreted from microglial cells cocultured with A. culbertsoni trophozoites or lysate increased after 6 hours of incubation, and the amounts of IL-1β secreted from microglial cells cocultured with A. culbertsoni trophozoites after 6 hours of incubation were similar to those secreted by the control group, but these amounts decreased during cultivation with A. culbertsoni lysate. These results suggest that pathogenic A. culbertsoni induces cytopathic effects in primary-cultured rat microglial cells, and that these effects are characterized by the necrosis of microglial cells and changes in the levels of secretion of TNF-α and IL-1β from microglial cells.

The primary sequences of nuclear DNA, RNA, and proteins that are available for Acanthamoeba all indicate that the genus Acanthamoeba is similar to those found in other organisms. Actin has the most highly conserved amino acid sequence found to date among Acanthamoeba proteins. Calmodulin also is highly conserved, but its amino acid sequence is not complete. Profilin and myosin amino acid sequences have diverged significantly more than comparable sequences in other organisms, but in both cases sequences are more conserved in the N-terminal halves of the molecules. Data available to date support previous evidence (based on rRNA sequences) that Acanthamoeba genes are at least as closely related to those of higher organisms (Sogin, 1989). However, the mitochondrial genome of Acanthamoeba deserves further study, whereas the RFLP data available for Acanthamoeba may be useful both for the clinical identification of amoebae and for phylogenetic comparisons. Moreover, variations in nuclear gene DNA sequences among different strains of Acanthamoeba may be useful for the development of oligonucleotide probes that can be used in clinical situations to identify isolates.

The Acanthamoeba genes considered are those of 5S, 5.8S and 18S rRNA, actin I, profilins Ia/b and II, myosin IB, IC and II, and calmodulin. Introns have been found in the actin and myosin genes. The location of the actin intron is unique, but many of the myosin introns occur at the same sites as introns in the myosin of other organisms. Sequence comparisons, especially of 5S and 5.8S rRNA and actin, support previous evidence, based primarily on 18S rRNA, that Acanthamoeba genes are at least as closely related to those of higher plants and animals as they are to various other protozoan genera. The functional organization of the nuclear rDNA transcription unit promoter region has been studied extensively. Restriction fragment length profile studies of mitochondrial DNA have revealed relatively high levels of overall sequence diversity, but information on the structure and function of individual genes is needed. Restriction site maps reflecting variations in RFLP patterns appear to have potential as tools for taxanomic studies of the Acanthamoeba.

Acanthamoeba has at least three actin genes (Jantzen, 1981; Nellen and Gallwitz, 1982), and the actins from many sources are highly conserved molecules of 374-375 amino acids. The actin I amino acid sequence of Acanthamoeba is slightly more closely related to the cytoplasmic and muscle actins of mammals than it is to most other protists. Several isoforms of the small actin-binding protein profilin have been sequenced (Ampe et al., 1985, 1988). The profilins of Acanthamoeba have an actin capping activity that is not typically seen in other profilins (Pollard and Cooper, 1986). Sequences similarities among the various profilins are highest in the N-terminal region corresponding to the 1st 34 amino acids of the Acanthamoeba protein (Byers et al., 1990).

One Acanthamoeba myosin II heavy chain gene (M II) has been sequenced (Hammer et al., 1987). Myosin II is the amoeba myosin most resembles muscle myosins. Two Acanthamoeba myosin I heavy chain genes (MIB, MIC) have been sequenced, but more are likely to be found because three isoforms of myosin I protein have been purified (Lynch et al., 1989). A recently sequenced gene of myosin I heavy chain from Dictyostelium (Jung et al., 1989) codes for a protein remarkably similar to Acanthamoeba MIB and MIC. The evolutionary affinities of Acanthamoeba myosins like those of higher life forms are evident from the locations of introns. Moreover, the calcium-binding regulatory protein calmodulin of Acanthamoeba has been partially sequenced (Wylie and Vanaman, 1987).

Considering that the Acanthamoeba have both highly phagocytic activity and tissue invasive behavior, it may be speculated that proteinases should be involved in their metabolic processes. Yun et al. (1999) isolated a cysteine proteinase from A. culbertsoni that has cathepsin L-like characteristics. Phylogenetic analysis based on the amino acid sequence of cysteine proteinase indicated that AcCP2 is closely related with papaya. Hong et al. (2002) isolated a cDNA encoding a mammalian cathepsin L-like cysteine proteinase from A. healyi, and identified a cDNA encoding a subtilisin-like serine proteinase of A. healyi (Hong et al., 2000).

The identification of the DNA amplicons representing differentially expressed mRNAs in the blood cells of mice infected with A. culbertsoni was attempted using the differential display reverse transcriptionpolymerase chain reaction (RT-PCR), which could be a prospective candidate for the development of a DNA probe for early diagnosis (Park, 1996).

Phylogenetic analyses that included the sequence of a single nuclear small subunit ribosomal RNA gene (18S or ssu rDNA) from B. mandrillaris suggested that this amoeba is closely related to Acanthamoeba. Booton et al. (2003) tested whether this is true for Balamuthia. No variation in the nuclear rDNA sequences and low levels of variation in mitochondrial rDNA were found, and both gene sequences were consistent with a single genotype for B. mandrillaris. The mitochondrial sequences of B. mandrillaris are unique and should be useful for the development of genus-specific diagnostic probes.

Pathogenic Naegleria have also been isolated from the nasal cavities of individuals with no history of water exposure, thus suggesting the possibility of airborne infection, and amoebae have been isolated from large numbers of throat swab culture, which is supported by findings of amoebic invasion of the nasal mucosa and olfactory nerves and olfactory bulb involvement. Acanthamoeba was detected and identified in the bronchial washings of a Korean patient with pneumonia, and Acanthamoeba infections have been demonstrated in both hard and soft lens wearers. Usually, almost all PAME patients have a history of swimming in a freshwater lake, pond, stream, hot spring, or swimming pool a few days before symptoms onset. The detection of N. fowleri in heated discharge water has been reported. Virulent strains are also found in lakes, and in any source of thermal discharge. Moreover, N. fowleri cysts produced in summer months may survive the winter and be capable of growth the following summer.

From epidemiological and experimental observations, it is apparent that infection results from organisms being taken into the nose in water. N. fowleri enters the nose and penetrates the olfactory mucosa and the cribriform plate and then travels via the olfactory nerves to the brain. Although the only known portal of entry for Naegleria is the olfactory neuroepithelium, Acanthamoeba species may enter through ulcerated or broken skin or the eye, and possibly through the lungs. Four Acanthamoeba species — A. culbertsoni, A. polyphaga, A. castellanii, A. astronyxis — and possibly others are known to cause disease in man.

Ahn et al. (1979) observed the fate of free-living amoebae when inoculated into the oral cavity of mice, and when exposed in digestive juice ingredients. The amoebae survived ordinarily used food preservative concentrations. Pepsin with hydrochloric acid showed the strong amoebicidal action, suggesting that the inoculated amoebae might be destroyed in the stomach, and thus fail to propagate in the gastrointestinal tract or penetrate extra-intestinal organs. Acids, such as hydrochloric acid and vinegar showed a stronger amoebicidal action, which may explain why amoeba find the oral route more difficult than the nasal route penetrating the nervous system.

Invasion and penetration of B. mandrillaris into the CNS probably arises by haematogenous spread from a primary focus of infection in the lower respiratory tract or skin (Martinez and Visvesvara, 1997). The ulcerative skin lesions may serve as a portal of entry or may represent 'terminal' haematogenous infection dissemination.

To determine the pathogenicity of free-living amoebae, the following trials have been reported. Three Korean isolates of Acanthamoeba sp. from the environment were studied, and differences in isoenzyme profiles by strain investigated (Im, 1990; Im et al., 1999). The basic test used for confirming pathogenicity was via intranasal infection, which led to experimental amoebic meningoencephalitis.

Clinically, encephalitis caused by pathogenic freeliving amoebae is due to the presence of a single or multiple space-occupying lesions. The central nervous system disease caused by Acanthamoeba occurs principally in immunosuppressed individuals, chronic alcoholics, or debilitated persons. Acanthamoeba or any other free-living amoebae that causes subacute and/or chronic granulomatous amoebic encephalitis (GAE), also causes a nonfatal, but nevertheless painful, vision-threatening infections of the human cornea, Acanthamoeba keratitis. Infections due to Acanthamoeba have also been reported in a variety of animals (Ma et al, 1990).

Meningoencephalitis caused by Acanthamoeba may present as an acute suppurative inflammation of the brain and meninges, like that seen with N. fowleri. However, Acanthamoeba is generally reported to cause a more chronic form of meningoencephalitis which has frequently been observed in chronically ill and immunosuppressed patients. Therefore, the disease usually has a gradual onset and takes a prolonged chronic course. Some of the predisposing factors include diabetes, alcoholism, Hodgkin's disease, pregnancy, and steroid therapy. Symptoms at onset are a sore throat and fever followed by headache and other signs of meningeal irritation. Acute symptoms begin with a sore throat, a blocked or discharging nose and are frequently associated with parosmia, headache and fever. The illness progresses rapidly, with increased headache and pyrexia, vomiting, neck stiffness and mental confusion, culminating in coma and death within four to seven days.

The infection produced by N. fowleri occurs principally in immunocompetent children and young adults with a history of contact with fresh water. Infection is fulminating and nearly always fatal. Early symptoms of Naegleria infection include vague upper respiratory distress, headache, lethargy, and occasionally olfactory problems. The acute phase includes a sore throat, a stuffy blocked or discharging nose, and severe headache. Progressive symptoms include pyrexia, vomiting, and neck stiffness. Mental confusion and coma usually occur approximately 3 to 5 days prior to death.

B. mandrillaris produces encephalitis in the very young or in the very old. B. mandrillaris can infect healthy and immunosuppressed hosts of both sexes, and there may be no history of swimming or exposure to contaminated water. Encephalitis due to this amoeba usually runs a protracted insidious clinical course with an unknown incubation period, which is definitely longer than 10 days and may be several months.

Case reports have been numerous from the United States, Belgium, Czechoslovakia, England, Australia, New Zealand, India, Zambia, Nigeria, Germany, Netherlands and Korea. Up to October 1995, more than 200 cases of PAME due to N. fowleri, and as many as 100 cases of GAE due to Acanthamoeba spp. had been reported worldwide. Seven isolates of B. mandrillaris were identified, including 5 from humans and 2 from animals (mandrill baboon, horse) (Schuster and Visvesvara, 2001).

Prior to 1989, the identification of the causative agent of granulomatous amoebic encephalitis, in the absence of culture isolation or immunohistological assay, was based on the presence of amoebic cysts in tissue sections; since N. fowleri does not produce cysts in tissue whereas Acanthamoeba does. Hence many cases due to Acanthamoeba were identified on the basis of cysts in tissue sections. B. mandrillaris infections, diagnosed mainly at postmortem, have been identified in both immunocompromised and immunocompetent individuals. Isolation of B. mandrillaris trophozoites and the production of specific serum for B. mandrillaris were instrumental in the differentiation of Balamuthia and Acanthamoeba encephalitis (Huang et al., 1999).

A patient's history of swimming in thermal or stagnant water several days prior to onset of symptoms of severe meningitis or meningoencephalitis should suggest a diagnosis of Naegleria infection. An immediate attempt should be made to detect and to isolate the amoebae from cerebrospinal fluid. Naegleria can be detected and identified in histopathologic sections by immunofluorescence and immunoperoxidase methods. A firm diagnosis of Acanthamoeba infection depends on the detection and identification of the amoebae in cerebrospinal fluid in cases with a central nervous system infection, in scrapings from corneal lesions or cutaneous infections, or in cultures of materials from these sources.

The symptoms resemble those of fulminating bacterial meningitis, but an examination of cerebrospinal fluid shows a less purulent reaction, more numerous mononuclear cells, and higher protein and sugar levels. Amoebae are present in cerebrospinal fluid but are difficult to identify, and when motile may be confused with motile macrophages.

Cultivation on a 1.5% non-nutrient agar plate seeded with Escherichia coli is recommended for isolation of either Naegleria or Acanthamoeba from cerebrospinal fluid or from brain or other tissues. Because meningoencephalitis from Naegleria infection develops rapidly, in suspected cases with an elevated cell count, it is worthwhile culturing cerebrospinal fluid even if no amoebae are recognized in direct or wet mount examinations.

Serological tests can be useful for detecting the presence of circulating antibody against Acanthamoeba or Naegleria (Im and Oh, 1978; Im and Soh, 1978). However, species identification is not easy, because reliable diagnostic agents based on species-specific antibodies are not available. Considering the possibility of specific antibody production, Im et al. (1983) developed a monoclonal antibody against A. royreba. Ryu and Im (1992) attempted to produce several clones secreting anti-N. fowleri monoclonal antibodies that had demonstrated immunodiagnostic potential. An examination of sections of formalin-fixed tissues from cases of meningoencephalitis showed that indirect immunofluorescent staining or indirect immunoperoxidase staining should be useful in the localization and identification of amoebae. Tissue stains are also effective and cysts can be stained with iron hematoxylin, Giemsa, Gomori's methenamine silver, periodic acid-Schiff (PAS), or calcofluor white. In cases of presumptive pyogenic meningitis, the computerized tomographic appearance of basal arachnoiditis should alert the staff to possibility of acute PAM.

In terms of the detection of Acanthamoeba, PCR using non-radioactive rDNA probes, which is a specific, rapid, sensitive, and safe-practical method, was developed by Lai et al. (1994). This PCR procedure provides increased sensitivity and the direct detection of as few as 10 Acanthamoeba trophozoites.

A diagnosis of Balamuthia encephalitis is made when the trophozoites and cysts are identified in tissues or the agent is isolated in culture. Brain and skin biopsies for culture and histologic examinations with hematoxylin and eosin or special stains like Gomori's methenamine silver and PAS are also useful. However, some immunohistological techniques, e.g., indirect immunofluorescence assay, or electron microscopy are necessary to identify B. mandrillaris in tissue sections (Denney, 1997). A serum antibody test that may be helpful in the diagnosis was developed for B. mandrillaris infection (Huang et al., 1999). Neuroimaging by CT and MRI of the head may also be helpful for diagnosis.

The treatment of Acanthamoeba meningoencephalitis has not been largely successful. Granulomatous encephalitis due to Acanthamoeba sp. is unresponsive to chemotherapy. Treatments were credited with prolonging life in a fatal case and possibly saving life in another. The therapy of amoebic keratitis and uveitis likewise remain problematical. Acanthamoeba keratitis usually necessitates corneal grafting although topical anti-microbial therapy may be required for many months before surgery can be undertaken. Cysts of A. polyphaga are extremely resistant and abundant in corneal scrapings and sections from patients under treatment. Clinical observations suggest the beneficial effects of natamycin (primaricin) and rifampin and in a few cases keratoplasty has been successful.

Although sulfadiazine has been shown to protect mice from infection by pathogenic strains of Acanthamoeba, it has proved useless in human cases. To be effective, treatment should be started early, but until a drug with specific activity against the organism suitable for use by a parenteral route and with the ability to reach therapeutic levels in brain tissue is found, successful treatment is unlikely. One patient in California was successfully treated with amphotericin B, miconazole and rifampin (Ma et al., 1990). A synergistic effect was found between miconazole and amphotericin B in vitro; however, rifampin was ineffective. Amoebae may be sensitive in vitro to clotrimazole, pentamidine, polymyxin-B, 5-fluorocytosine, paromomycin, miconazole or acriflavine.

No satisfactory treatment for primary amoebic meningoencephalitis is known. N. fowleri meningoencephalitis is usually fatal. However, a few patients have responded to amphotericin B administered both intravenously and intrathecally. A marked synergism between amphotericin B and tetracycline has been observed when cotreated to N. fowleri infected mice (Ma et al., 1990). Despite early and intensive treatment with amphotericin B, PAME is usually fatal. Nevertheless, amphotericin B remains the only known effective agent for the treatment of PAME (Ma et al., 1990).

There is presently no known effective treatment for encephalitis due to B. mandrillaris, though experimental studies indicate that the amoeba is sensitive to pentamidine isethionate, azithromycin, and clarithromycin (Schuster and Visvesvara, 1998).

In view of the demonstrated susceptibilities of Acanthamoeba species to various drugs in vitro and in experimental animals the outlook in cases diagnosed early would seem to be favorable. However, Naegleria menigoencephalitis is usually fatal within a week of onset, and survival depends on an early suspicion of infection. In addition, the prognosis of Balamuthia encephalitis is very poor.

Recently these amoebae have been isolated from hot tubes, contact lens-care solutions, and intrauterine contraceptive devices. Many reports, together with the fact that Acanthamoeba spp., N. fowleri, and Hartmannella sp. can harbor pathogenic microorganisms such as Legionella and/or Mycobacterum indicate the public health importance of these amoebae. Since fatal Acanthamoeba meningoencephalitis has occurred in chronically ill or debilitated patients or in those with an impaired immune system, caution in the use of immunosuppressive therapy is indicated. The recovery of Acanthamoeba in nasal isolates and pharyngeal swabs from humans indicates human introduction of these organisms into swimming pool settings. Moreover, the genus Acanthamoeba has been detected in a number of contact lens containers (Lee et al., 1997). With the increasing reports of infection in soft contact lens wearers it is important to carefully consider the effectiveness of various contact lens disinfection systems. Wearers of contact lenses should receive precise instructions on lens care, in particular, about the risk of home-made non-sterile saline rinsing solutions.

Our incomplete recognition of human infections caused by free-living amoebae and the increasing number of reports on the isolation of free-living amoebae from natural sources suggest that caution should be exercised in the dumping of sewage and spoils. It was found that N. fowleri was widely distributed in streams and canals, and that it is associated with warm factory effluent. Heavy chlorination to 10 ppm failed to eradicate N. fowleri from a swimming pool, but salination to 0.7% resulted in negative cultures for a period of 5 months. The pathogenic Naegleria tolerates even higher temperatures up to 45-46℃. The only known preventable risk of infection is contact with stagnant or thermal water. General preventive measures include the public awareness of the potential hazards of contaminated water. It has been recommended that warm discharge water should not be used directly for sports or recreational purposes.