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"Ui-Wook Hwang"

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"Ui-Wook Hwang"

Original Articles

Detection and genotyping of Giardia intestinalis isolates using intergenic spacer (IGS)-based PCR
Jong-Ho Lee, Jongweon Lee, Soon-Jung Park, Tai-Soon Yong, Ui-Wook Hwang
Korean J Parasitol 2006;44(4):343-353.
Published online December 20, 2006
DOI: https://doi.org/10.3347/kjp.2006.44.4.343

Giardia intestinalis infections arise primarily from contaminated food or water. Zoonotic transmission is possible, and at least 7 major assemblages including 2 assemblages recovered from humans have been identified. The determination of the genotype of G. intestinalis is useful not only for assessing the correlation of clinical symptoms and genotypes, but also for finding the infection route and its causative agent in epidemiological studies. In this study, methods to identify the genotypes more specifically than the known 2 genotypes recovered from humans have been developed using the intergenic spacer (IGS) region of rDNA. The IGS region contains varying sequences and is thus suitable for comparing isolates once they are classified as the same strain. Genomic DNA was extracted from cysts isolated from the feces of 5 Chinese, 2 Laotians and 2 Koreans infected with G. intestinalis and the trophozoites of WB, K1, and GS strains cultured in the laboratory, respectively. The rDNA containing the IGS region was amplified by PCR and cloned. The nucleotide sequence of the 3' end of IGS region was determined and examined by multiple alignment and phylogenetic analysis. Based on the nucleotide sequence of the IGS region, 13 G. intestinalis isolates were classified to assemblages A and B, and assemblage A was subdivided into A1 and A2. Then, the primers specific to each assemblage were designed, and PCR was performed using those primers. It detected as little as 10 pg of DNA, and the PCR amplified products with the specific length to each assemblage (A1, 176 bp; A2, 261 bp; B, 319 bp) were found. The PCR specific to 3 assemblages of G. intestinalis did not react with other bacteria or protozoans, and it did not react with G. intestinalis isolates obtained from dogs and rats. It was thus confirmed that by applying this PCR method amplifying the IGS region, the detection of G. intestinalis and its genotyping can be determined simultaneously.

Citations

Citations to this article as recorded by  Crossref logo
  • Genetic diversity and molecular diagnosis of Giardia
    Yankai Chang, Junqiang Li, Longxian Zhang
    Infection, Genetics and Evolution.2023; 113: 105482.     CrossRef
  • The controversies surrounding Giardia intestinalis assemblages A and B
    Patricia Zajaczkowski, Rogan Lee, Stephanie M. Fletcher-Lartey, Kate Alexander, Abela Mahimbo, Damien Stark, John T. Ellis
    Current Research in Parasitology & Vector-Borne Diseases.2021; 1: 100055.     CrossRef
  • Concordance of Giardia duodenalis assemblages determined by different PCR methodologies in three observational studies in Cuba
    Luis Enrique Jerez Puebla, Fidel A. Núñez Fernández, Jorge Fraga, Lázara Rojas Rivero, Iraís Atencio Millán, Lucía Ayllón Valdés, Isabel Martínez Silva, Norbert Müller, Lucy J. Robertson
    Experimental Parasitology.2020; 209: 107814.     CrossRef
  • Nested PCR targeting intergenic spacer (IGS) in genotyping of Giardia duodenalis isolated from symptomatic and asymptomatic infected Egyptian school children
    Eman M. Hussein, Ola A. Ismail, Amira B. Mokhtar, Samer E. Mohamed, Rania M. Saad
    Parasitology Research.2017; 116(2): 763.     CrossRef
  • Predominance of Giardia lamblia assemblage A among iron deficiency anaemic pre-school Egyptian children
    Eman M. Hussein, Wafaa M. Zaki, Shahira A. Ahmed, Amal M. Almatary, Nader I. Nemr, Abdalla M. Hussein
    Parasitology Research.2016; 115(4): 1537.     CrossRef
  • Correlation of Giardia duodenalis assemblages with clinical and epidemiological data in Cuban children
    Luis Jerez Puebla, Fidel A. Núñez, Yenisey Alfonso Fernández, Jorge Fraga, Lázara Rojas Rivero, Iraís Atencio Millán, Lucía Ayllón Valdés, Isabel Martínez Silva
    Infection, Genetics and Evolution.2014; 23: 7.     CrossRef
  • Development of a Diagnostic Kit to Detect Cryptosporidium parvum and Giardia lamblia
    Hyeng-Il Cheun, Byung-Suk Chung, Da-Won Ma, Bo-La Goo, Shin-Hyeong Cho, Mi-jung Ji, Won-Ja Lee
    Osong Public Health and Research Perspectives.2013; 4(3): 146.     CrossRef
  • Zoonotic potential of Giardia
    Una Ryan, Simone M. Cacciò
    International Journal for Parasitology.2013; 43(12-13): 943.     CrossRef
  • Stool sample storage conditions for the preservation of Giardia intestinalis DNA
    Salih Kuk, Suleyman Yazar, Ulfet Cetinkaya
    Memórias do Instituto Oswaldo Cruz.2012; 107(8): 965.     CrossRef
  • Genotypes of Giardia intestinalis clinical isolates of gastrointestinal symptomatic and asymptomatic Saudi children
    Hamdan I. Al-Mohammed
    Parasitology Research.2011; 108(6): 1375.     CrossRef
  • Molecular diagnosis of infections and resistance in veterinary and human parasites
    Peter W. Hunt
    Veterinary Parasitology.2011; 180(1-2): 12.     CrossRef
  • Frequency of Giardia intestinalis assemblages isolated from dogs and humans in a community from Culiacan, Sinaloa, Mexico using β-giardin restriction gene
    Leticia Eligio-García, Adrián Cortes-Campos, Silvia Cota-Guajardo, Soyla Gaxiola, Enedina Jiménez-Cardoso
    Veterinary Parasitology.2008; 156(3-4): 205.     CrossRef
  • Molecular epidemiology of giardiasis
    Simone M. Cacciò, Una Ryan
    Molecular and Biochemical Parasitology.2008; 160(2): 75.     CrossRef
  • The molecular characterisation of Giardia from dogs in southern Germany
    S. Leonhard, K. Pfister, P. Beelitz, C. Wielinga, R.C.A. Thompson
    Veterinary Parasitology.2007; 150(1-2): 33.     CrossRef
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  • 83 Download
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Analysis of polymorphic region of GAM-1 gene in Plasmodium vivax Korean isolates
Weon-Gyu Kho, Joon-Yong Chung, Ui-Wook Hwang, Jin-Ho Chun, Yeong-Hong Park, Woo-Chul Chung
Korean J Parasitol 2001;39(4):313-318.
Published online December 31, 2001
DOI: https://doi.org/10.3347/kjp.2001.39.4.313

The identification, characterization and quantification of Plasmodium sp. genetic polymorphism are becoming increasingly important in the vaccine development. We investigated polymorphism of Plasmodium vivax GAM-1 (PvGAM-1) gene in 30 Korean isolates. The polymorphic region of the PvGAM-1 gene, corresponding to nt 3792-4029, was amplified using polymerase chain reaction (PCR) followed by sequencing. All of the P. vivax Korean isolates were one type of GAM-1 gene, which were identical to that of the Belem strain. It is suggested that PvGAM-1 could not be used as a genetic marker for identifying or classifying P. vivax Korean isolates. It revealed that the polymorphic pattern was acquired basically by duplication and modification or deletion event of a 33 bp-motif fragment ended by poly guanine (G) and that there were at least three complete and one partial 33 bp-motif sequences within the polymorphic region in the longest cases such as those of South Korean and Belem isolates. In addition, we clustered P. vivax isolates with parsimonious criteria on the basis of PvGAM-1 polymorphic patterns (insertion/deletion patterns).

Citations

Citations to this article as recorded by  Crossref logo
  • Complete mitochondrial genome of a malaria vector mosquito Anopheles sinensis from South Korea
    Ashraf Akintayo Akintola, Bia Park, Eun Hwa Choi, Ui Wook Hwang
    Mitochondrial DNA Part B.2022; 7(5): 881.     CrossRef
  • Genetic Diversity of Plasmodium vivax Causing Epidemic Malaria in the Republic of Korea
    Young Yil Bahk, Jeonga Kim, Seong Kyu Ahn, Byoung-Kuk Na, Jong-Yil Chai, Tong-Soo Kim
    The Korean Journal of Parasitology.2018; 56(6): 545.     CrossRef
  • Genetic Characteristics of Polymorphic Antigenic Markers among Korean Isolates of Plasmodium vivax
    Seung-Young Hwang, So-Hee Kim, Weon-Gyu Kho
    The Korean Journal of Parasitology.2009; 47(Suppl): S51.     CrossRef
  • Plasmodium vivax in India
    Hema Joshi, Surendra K. Prajapati, Anju Verma, Simon Kang’a, Jane M. Carlton
    Trends in Parasitology.2008; 24(5): 228.     CrossRef
  • Allelic dimorphism of Plasmodium vivax gam-1 in the Indian subcontinent
    Surendra K Prajapati, Anju Verma, Tridibes Adak, Rajpal S Yadav, Ashwini Kumar, Alex Eapen, Manoj K Das, Neeru Singh, Surya K Sharma, Moshahid A Rizvi, Aditya P Dash, Hema Joshi
    Malaria Journal.2006;[Epub]     CrossRef
  • 8,078 View
  • 58 Download
  • Crossref
Comparative study on longevity of Anopheles sinensis in malarious and non-malarious areas in Korea
Han-Il Ree, Ui-Wook Hwang
Korean J Parasitol 2000;38(4):263-266.
Published online December 31, 2000
DOI: https://doi.org/10.3347/kjp.2000.38.4.263

An outbreak of vivax malaria has been occurring in northern part of Kyonggi-do and north-western part of Kangwon-do, where are located near the demilitarized zone, since 1993. For understanding of epidemiological features of malaria, the probability of daily survival of Anopheles sinensis, the vector species of malaria was compared in malarious and non-malarious areas in July-August, 2000. Total 915 females collected at three locations in malarious areas were dissected for ovaries, and 64.6% of the parous rate was found. Total 758 females collected at three locations in non-malarious areas were dissected, and 57.8% of the parous rate was observed. It was estimated from the parous rates that the probability of daily survival of An. sinensis females was 0.864 in malarious areas and 0.850 in non-malarious areas, which was not significantly different.

Citations

Citations to this article as recorded by  Crossref logo
  • Complete mitochondrial genome of a malaria vector mosquito Anopheles sinensis from South Korea
    Ashraf Akintayo Akintola, Bia Park, Eun Hwa Choi, Ui Wook Hwang
    Mitochondrial DNA Part B.2022; 7(5): 881.     CrossRef
  • Vector Competence ofAnopheles kleiniandAnopheles sinensis(Diptera: Culicidae) From the Republic of Korea to Vivax Malaria-Infected Blood From Patients From Thailand
    Ratawan Ubalee, Heung-Chul Kim, Anthony L. Schuster, Patrick W. McCardle, Siriporn Phasomkusolsil, Ratree Takhampunya, Silas A. Davidson, Won-Ja Lee, Terry A. Klein
    Journal of Medical Entomology.2016; 53(6): 1425.     CrossRef
  • The unique distribution of the Plasmodium vivax merozoite surface protein 1 in parasite isolates with short and long latent periods from the Republic of Korea
    Youn-Kyoung Goo, Jun-Hye Moon, So-Young Ji, Dong-Il Chung, Yeonchul Hong, Shin-Hyung Cho, Won-Ja Lee, Jung-Yeon Kim
    Malaria Journal.2015;[Epub]     CrossRef
  • Annual variations in the number of malaria cases related to two different patterns of Anopheles darlingi transmission potential in the Maroni area of French Guiana
    Florence Fouque, Pascal Gaborit, Romuald Carinci, Jean Issaly, Romain Girod
    Malaria Journal.2010;[Epub]     CrossRef
  • Malaria transmission potential by Anopheles sinensis in the Republic of Korea
    Hee-IL Lee, Jong-Soo Lee, E-Hyun Shin, Won-Ja Lee, Yoon-Young Kim, Kyung-Ro Lee
    The Korean Journal of Parasitology.2001; 39(2): 185.     CrossRef
  • 8,096 View
  • 51 Download
  • Crossref
Mini Review

To choose one or more appropriate molecular markers or gene regions for resolving a particular systematic question among the organisms at a certain categorical level is still a very difficult process. The primary goal of this review, therefore, is to provide a theoretical information in choosing one or more molecular markers or gene regions by illustrating general properties and phylogenetic utilities of nuclear ribosomal DNA (rDNA) and mitochondrial DNA (mtDNA) that have been most commonly used for phylogenetic researches. The highly conserved molecular markers and/or gene regions are useful for investigating phylogenetic relationships at higher categorical levels (deep branches of evolutionary history). On the other hand, the hypervariable molecular markers and/or gene regions are useful for elucidating phylogenetic relationships at lower categorical levels (recently diverged branches). In summary, different selective forces have led to the evolution of various molecular markers or gene regions with varying degrees of sequence conservation. Thus, appropriate molecular markers or gene regions should be chosen with even greater caution to deduce true phylogenetic relationships over a broad taxonomic spectrum.

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